Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922875.1_cds_XP_016471632.1_63949
CDS Infomation

[gene=LOC107793735] [db_xref=GeneID:107793735] [protein=ATPase family AAA domain-containing protein 3-like] [protein_id=XP_016471632.1] [location=complement(join(18697..19228,19385..19533,19857..20199,21865..21955,22901..23210,23955..24065,24924..25019,25125..25409))] [gbkey=CDS]
Sequence

ATGGCTGCTTCGAAGTTAACTTCAATGGCAGCAATGGCAGCTGCAGCTGCCGCAGCAGCT
TCATGTTCCACTTTCCCCAACCGCGCGTACGCCGACGCTCCCTTTCGCTTCTCCCCCTTT
TCTTCATCTCCATCTCCTCCACCACAGGCTCCTCATTCGGACTCTCAATCCGGGTCGGAT
TCAAATGATCCTCCTGAAGATTCAAGAGGCGGGTTCAATCCGGAATCATTAGAGAGAGGT
GCAAAAGCTCTTAGAGAAATCAATAGCTCTCCCTATCACAAACAGGTGTTTGATGTGATG
AGAAAGCAGGAAAAAAGCCGGCTTGCGGATATTGCTGCAGAGAAAGTTCATTATGAGGCA
ATCCAGGCTCAAGCTGATATTGATAAACAGCGAAAATGGGGAGAAGACCAGCGGAATCTA
TACCATCAACAATCACAGGCCAAAGCACAAATGCTAAGATACGAAGATGAATTGGCTAGA
AAAAGAATGCAGACAGATCATGAAGCTCAAAGAAGACACAATACTGAACTGGTTAAAATG
CAAGAGGAGTCATCAATAAGAAAAGAACAAGCAAGACGAGCAACAGAAGAGCAAATTCAA
GCACAACAAAGACAAACTGAGAAAGAGAGAGCTGAAATAGAACGAGAAACAATAAGAGTG
AAGGCCATGGCTGAGGCAGAAGGTAGGGCACATGAAGCTAAACTAACTGAAGATCATAAA
AGGAGGATGCTGATTGAGAAAATAAATGGTGAAAGAGAGAAGTGGCTTGCAGCCATTAAT
ACAACTTTTAGTCATGTTGAAGAGGGTTTCCGGATTCTATTGACTGATAGGAGTAAATTG
GTAATGACTGTTGGCGGAGTCACTGCATTGGCTGCTGGAGTTTATACCACCAGGGAAGGT
GCCAGAGTTACCTGGGGATATATTAACAGAATTCTTGGACAGCCATCATTAATTCGGGAA
TCATCTATGTCAAGATTTCCTTGGTCAGGGATGATTTCTCGAGTAGCTGACAAAGGACTC
AAGTTTGGTACAGCTGCTGGATTGGCAGCACCTGGACAAAATAAATCTGCTTTTGGAAAC
ATTGTGTTGCATCCTTCTCTTCAGAGGAGAATAGAACACCTCGCTAGGGCCACAGCAAAC
ACCAAGTCTCACCAGGCACCATTTCGCAATATGCTCTTTTATGGTCCTCCTGGCACTGGG
AAAACAATGGTTGCTAGGGAGATCGCAAGAAAATCGGGTTTGGACTATGCCATGATGACT
GGAGGGGATGTTGCACCCCTGGGTGCACAGGCTGTCACCAAAATTCACGAGATATTCGAT
TGGGCCAAAAAATCAAATAAAGGCCTACTGCTTTTCATTGATGAGGCTGATGCATTTTTG
TGCGAGCGGAATAGTACATACATGAGTGAAGCTCAGCGAAGTGCTTTAAATGCTTTACTC
TTTCGAACAGGGGACCAGTCCCGAGACGTAGTTCTTGTCCTTGCGACCAACAGGCCAGGA
GATCTAGACAGTGCTGTCACTGACCGTATAGACGAAGTTATCGAATTCCCTCTCCCTCAA
GAAGAAGAGCGTTTCAAATTGCTGAAGCTCTATTTGAACAAGTACCTTGCTGGTGAAGGA
GACAGTGACAGCAATTCTAAGTGGGGGCACCTCTTCAAGAAGAACCAACAAAAGAGGATA
ACCATACAAGATTTGTCTGATGATGTGATTAGAGAGGCTGCTAAGAAGATAGAAGGATTC
TCTGGCCGTGAGATTGCAAAACTTATGGCAAGTGTTCAAGCAACTGTATATGGGAGCCCA
GATTGTGTTCTTGATTCTCAACTGTTCAAGGAAATCGTAGATTACAAGGTCGCTGAGCAT
CACCAACGAATAAAACTAGCTGCTGAAGGTATGGAGCCAACTTACCAGGGGAATTAA

Peptide Sequence

PEP ID

XP_016471632.1
PEP Infomation

PREDICTED: ATPase family AAA domain-containing protein 3-like [Nicotiana tabacum]
Sequence

MAASKLTSMAAMAAAAAAAASCSTFPNRAYADAPFRFSPFSSSPSPPPQAPHSDSQSGSD
SNDPPEDSRGGFNPESLERGAKALREINSSPYHKQVFDVMRKQEKSRLADIAAEKVHYEA
IQAQADIDKQRKWGEDQRNLYHQQSQAKAQMLRYEDELARKRMQTDHEAQRRHNTELVKM
QEESSIRKEQARRATEEQIQAQQRQTEKERAEIERETIRVKAMAEAEGRAHEAKLTEDHK
RRMLIEKINGEREKWLAAINTTFSHVEEGFRILLTDRSKLVMTVGGVTALAAGVYTTREG
ARVTWGYINRILGQPSLIRESSMSRFPWSGMISRVADKGLKFGTAAGLAAPGQNKSAFGN
IVLHPSLQRRIEHLARATANTKSHQAPFRNMLFYGPPGTGKTMVAREIARKSGLDYAMMT
GGDVAPLGAQAVTKIHEIFDWAKKSNKGLLLFIDEADAFLCERNSTYMSEAQRSALNALL
FRTGDQSRDVVLVLATNRPGDLDSAVTDRIDEVIEFPLPQEEERFKLLKLYLNKYLAGEG
DSDSNSKWGHLFKKNQQKRITIQDLSDDVIREAAKKIEGFSGREIAKLMASVQATVYGSP
DCVLDSQLFKEIVDYKVAEHHQRIKLAAEGMEPTYQGN

Transcript Sequence

Gene sequence data has not been registered.